AnnotCompute

eagle-i ID

Resource Type

Properties

1. Related grant number

   NHGRI grant R21 HG004521

2. Resource Description

   "AnnotCompute is a tool to identify similar functional genomics experiments (mainly microarray experiments) based on standardized annotations containing the MGED Ontology (MO) terms."

3. Used by

   Computational Biology and Informatics Laboratory

4. Operating System

   Web based

5. Data Input

   IDF

6. Data Input

   ArrayExpress ID

7. Data Input

   SDRF

8. Data Output

   Clusters of similar functional genomics experiments

9. Software purpose

   Metadata search and retrieval objective

10. Related Publication or Documentation

    AnnotCompute: annotation-based exploration and meta-analysis of genomics experiments

11. Website(s)

    http://www.cbil.upenn.edu/AnnotCompute/

12. Related Technique

    Nucleic acid microarray assay

13. Developed by

    Stoeckert, Christian J., Jr., Ph.D.

14. Developed by

    Manduchi, Elisabetta, Ph.D.

15. Developed by

    Zheng, Jie, Ph.D.

16. Developed by

    Liu, Junmin

17. Developed by

    Stoyanovich, Julia, Ph.D.