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Crimson
eagle-i ID
http://eagle-i.itmat.upenn.edu/i/0000013d-603d-564c-5757-7bd780000000
Resource Type
Properties
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Related grant number
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CIPRES
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Resource Description
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"Crimson facilitates the extraction of sub-trees from very large phylogenetic trees. Trees are loaded into a shared database and sampled according to schemes controlled by the user. Comprehensive graphical dialogs allow users to easily manage and query trees in the database. Queries can be stored in the database to be shared with other users and moved between databases. A command line interface enables users to write their own function and scripts to manage the database, manipulate the trees and queries, and automate any of the built-in functions."
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Used by
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Kim Laboratory: Computational Evolutionary Biology
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Operating System
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Linux
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Operating System
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Mac OS X
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Operating System
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Windows (2000 or later)
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Data Input
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Phylogenetic tree
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Data Output
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Extracted sub-trees
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Software purpose
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Phylogenetic analysis objective
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Website(s)
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http://kim.bio.upenn.edu/software/crimson.shtml
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Developed by
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Kim, Junhyong., PhD
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Developed by
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Fisher, Stephen., PhD
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Software license
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Academic software license
