Crimson

eagle-i ID

Resource Type

Properties

1. Related grant number

   CIPRES

2. Resource Description

   "Crimson facilitates the extraction of sub-trees from very large phylogenetic trees. Trees are loaded into a shared database and sampled according to schemes controlled by the user. Comprehensive graphical dialogs allow users to easily manage and query trees in the database. Queries can be stored in the database to be shared with other users and moved between databases. A command line interface enables users to write their own function and scripts to manage the database, manipulate the trees and queries, and automate any of the built-in functions."

3. Used by

   Kim Laboratory: Computational Evolutionary Biology

4. Operating System

   Linux

5. Operating System

   Mac OS X

6. Operating System

   Windows (2000 or later)

7. Data Input

   Phylogenetic tree

8. Data Output

   Extracted sub-trees

9. Software purpose

   Phylogenetic analysis objective

10. Website(s)

    http://kim.bio.upenn.edu/software/crimson.shtml

11. Developed by

    Kim, Junhyong, Ph.D.

12. Developed by

    Fisher, Stephen, Ph.D.

13. Software license

    Academic software license