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GLGC GWAS: Lipid assocation scan meta-analysis results

eagle-i ID

http://eagle-i.itmat.upenn.edu/i/00000155-dbee-6ad5-627c-14a480000000

Resource Type

  1. Database

Properties

  1. Resource Description
    Dense genotyping in individuals of European, East Asian, South Asian, and African ancestry Analysis of metabochip data and Joint analysis of metabochip and GWAS data are available. Each table includes ten columns: the marker names in build hg18 and hg19, the marker names in rsid format, the two alleles of the SNP, the effect size associated with the SNP, the corresponding standard error, the number of individuals evaluated for the SNP, the combined p-value for the SNP and the frequency of the first allele (the trait increasing allele) in the 1000 Genomes European sample. The files include both genotyped and imputed SNPs and are provided in a compressed text file to conserve space.
  2. Used by
    Voight Laboratory
  3. Data Input
    LDL cholesterol association summary statistics
  4. Data Input
    HDL cholesterol association summary statistics
  5. Data Input
    Triglycerides association summary statistics
  6. Data Input
    Total cholesterol association summary statistics
  7. Topic
    Homo sapiens
  8. Topic
    coronary artery disease
  9. Topic
    Lipid metabolic process
  10. Topic
    Cholesterol metabolic process
  11. Related Publication or Documentation
    Discovery and refinement of loci associated with lipid levels
  12. Website(s)
    http://csg.sph.umich.edu/abecasis/public/
  13. Related Technique
    SNP genotyping assay
  14. Developed by
    Global Lipids Genetics Consortium
 
RDFRDF
 
Provenance Metadata About This Resource Record
  1. workflow state
    Published
  2. contributor
    fcoldren
  3. created
    2016-07-11T17:52:15.850-04:00
  4. creator
    fcoldren
  5. modified
    2016-07-11T17:56:53.854-04:00

Copyright © 2016 by the President and Fellows of Harvard College
The eagle-i Consortium is supported by NIH Grant #5U24RR029825-02 / Copyright 2016